metalsinglecell.tl.leiden

metalsinglecell.tl.leiden(adata, resolution=1.0, key_added='leiden', random_state=0, n_iterations=2, backend='igraph', variant='sync', commit_prob=0.9, copy=False)

Leiden clustering (sc.tl.leiden); writes adata.obs[key_added] (categorical).

backend="gpu" runs the Metal parallel Leiden; variant (“sync”|”colored”) and commit_prob tune its convergence (GPU path only; ignored for the igraph backend).

Parameters:

• resolution (float)

• key_added (str)

• random_state (int)

• n_iterations (int)

• backend (str)

• variant (str)

• commit_prob (float)

• copy (bool)